从源码安装 Clustal Omega

以下步骤基于 M1 Mac。

1. 下载源码并解压：

   BASH複製

   wget http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz && tar -xzvf clustal-omega-1.2.4.tar.gz && cd clustal-omega-1.2.4
   

2. 用 Homebrew 安装 argtable：

   BASH複製

   # You need install the Homebrew first if you haven't installed it.
   /bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
   
   brew install argtable
   

3. 编译并安装：

   BASH複製

   ./configure CFLAGS='-I/opt/homebrew/Cellar/argtable/2.13/include' LDFLAGS='-L/opt/homebrew/Cellar/argtable/2.13/lib'
   make
   make install 
   

4. 检查安装：

   BASH複製

   which clustalo
   

5. 之后可以这样使用它：

   BASH複製

   cd /path/to/your/sequence
   clustalo -i sequence.fasta -o output.fasta --seqtype=protein