This note is based on Linux Mint 21.3, it should be also useful if you running a Ubuntu.
XDS Related Software
Reference:https://wiki.uni-konstanz.de/xds/index.php/Installation
- XDS package:
- Other programs: XDS-Viewer, XDSSTAT, XDSCC12, XDSGUI, XSCALE_ISOCLUSTER, spot2pdb, generate_XDS.INP
- Option: check the installation(you may encounter the graphics packages error):
- XDS plugin that reads hdf5 files:
CCP4
Reference: https://www.ccp4.ac.uk/download/installation.html
- Download Package Manager on this website, then:
- Follow the instructions in Setup Manager's pages, and remember check "modify command line environment" in 2nd page.
Phenix
Reference: https://phenix-online.org/documentation/install-setup-run.html
Request a license on this website.
Download software on this website.
Install
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phenix &
autoPROC
Reference: https://www.globalphasing.com/autoproc/download/academic/snapshot/Ubuntu1804_64bit/index.html
Request a license on this website, the user and password used to download and a
.licencefile will be sent to your email.Installed CCP4 and XDS and set the environment as above.
Pre-requirement:
CodeBlock Loading...Download
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autoPX2
You need to enter the QQ group to get more information, I provide a copy to download for convenience:
CodeBlock Loading...Then you can use autoPX2 with the command
autopx.